COMPARATIVE GENOME OF TWO STRAIN MORAXELLA CATARRHALIS USING IN SILICO ANALYSIS

Oktira Roka Aji

Abstract


Moraxella catarrhalis can cause otitis media and exacerbations of chronic obstructive pulmonary disease in human. Here we describe the comparison between two publicly available genomes of two strain of M.catarrhalis using computational analysis to obtain genomic features between them. Comparative genomic analysis were carried out using available tools in public domain websites. The aim of this study was to investigate the differences and similarities between two strains by comparing their genomic sequences. The results indicated that may be used to offer better understanding M.catarrhalis lifestyle.

 

Keywords: Moraxella catarrhalis; In Silico; Comparative genome analysis


Full Text:

PDF

References


M. A. Nobrega and L. A. Pennacchio, 2003, J Physiol, vol. 554, no. 1, pp. 31–39.

S. P. W. De Vries, S. A. F. T. Van Hijum, W. Schueler, K. Riesbeck, J. P. Hays, P. W. M. Hermans, and H. J. Bootsma, 2010, J. od Bacteriol., vol. 192, no. 14, pp. 3574–3583.

A. Tan, L. V Blakeway, L. O. Bakaletz, M. Boitano, T. A. Clark, J. Korlach, M. P. Jennings, I. R. Peak, and L. Seib, 2017, Genome Announc., vol. 5, no. 21, pp. 16–17.

Brudno M, Malde S , Poliakov A et al., 2003, Bioinformatics. 19:1 i54-i62

Kumar, S. Stecher G. And Tamura K., 2016, Molecular Biology and Evolution 33: 1870-1874




DOI: http://dx.doi.org/10.18860/jip.v2i2.4504

Refbacks

  • There are currently no refbacks.


Published by Department of Pharmacy, Universitas Islam Negeri Maulana Malik Ibrahim Malang, Indonesia